Data-driven decomposition of brain dynamics with principal component analysis in different types of head impacts

Authors: Xianghao Zhan, Yuzhe Liu, Nicholas J. Cecchi, Olivier Gevaert, Michael M. Zeineh, Gerald A. Grant, David B. Camarillo

arXiv: 2110.14116v1 - DOI (q-bio.QM)
License: CC BY 4.0

Abstract: Strain and strain rate are effective traumatic brain injury predictors. Kinematics-based models estimating these metrics suffer from significant different distributions of both kinematics and the injury metrics across head impact types. To address this, previous studies focus on the kinematics but not the injury metrics. We have previously shown the kinematic features vary largely across head impact types, resulting in different patterns of brain deformation. This study analyzes the spatial distribution of brain deformation and applies principal component analysis (PCA) to extract the representative patterns of injury metrics (maximum principal strain (MPS), MPS rate (MPSR) and MPSXMPSR) in four impact types (simulation, football, mixed martial arts and car crashes). We apply PCA to decompose the patterns of the injury metrics for all impacts in each impact type, and investigate the distributions among brain regions using the first principal component (PC1). Furthermore, we developed a deep learning head model (DLHM) to predict PC1 and then inverse-transform to predict for all brain elements. PC1 explained >80% variance on the datasets. Based on PC1 coefficients, the corpus callosum and midbrain exhibit high variance on all datasets. We found MPSXMPSR the most sensitive metric on which the top 5% of severe impacts further deviates from the mean and there is a higher variance among the severe impacts. Finally, the DLHM reached mean absolute errors of <0.018 for MPS, <3.7 (1/s) for MPSR and <1.1 (1/s) for MPSXMPSR, much smaller than the injury thresholds. The brain injury metric in a dataset can be decomposed into mean components and PC1 with high explained variance. The brain dynamics decomposition enables better interpretation of the patterns in brain injury metrics and the sensitivity of brain injury metrics across impact types. The decomposition also reduces the dimensionality of DLHM.

Submitted to arXiv on 27 Oct. 2021

Explore the paper tree

Click on the tree nodes to be redirected to a given paper and access their summaries and virtual assistant

Also access our AI generated Summaries, or ask questions about this paper to our AI assistant.

Look for similar papers (in beta version)

By clicking on the button above, our algorithm will scan all papers in our database to find the closest based on the contents of the full papers and not just on metadata. Please note that it only works for papers that we have generated summaries for and you can rerun it from time to time to get a more accurate result while our database grows.