Sex Trouble: Common pitfalls in incorporating sex/gender in medical machine learning and how to avoid them

Authors: Kendra Albert, Maggie Delano

submitted to Cell Patterns as a perspective article
License: CC BY 4.0

Results of the summarizing process for the arXiv paper: 2203.08227v1

  • Comprehensive Summary
  • Key points
  • Layman's Summary
  • Blog article
False assumptions about sex and gender are deeply ingrained in the medical system, leading to binary, static, and concordant interpretations. Machine learning researchers must be aware of these assumptions to avoid perpetuating them. This perspective piece highlights three common mistakes made by researchers when dealing with sex/gender data: "sex confusion," which refers to the failure to understand what sex in a dataset signifies; "sex obsession," which assumes that sex assigned at birth is the relevant variable for most applications; and "sex/gender slippage," which conflates sex and gender even when only one is known. The authors then discuss how these pitfalls manifest in machine learning studies based on electronic health record (EHR) data. EHR data is widely used for various purposes, including retrospective analysis of patient outcomes and developing risk prediction algorithms. However, the misuse or misinterpretation of sex/gender data can lead to biased results and inadequate care for transgender individuals. To avoid methodological pitfalls, researchers are advised to work with data experts who have experience handling such data. Collaboration with clinicians can provide insights into how the data is used in clinical practice. Additionally, clear descriptions of how sex/gender data were collected and utilized should be provided in research papers. It is crucial to acknowledge any limitations or changes in variables over time. Incorporating gender carefully is another important consideration. Gender encompasses multiple dimensions such as identity, relations, roles, and institutionalized aspects. Researchers should not conflate sex and gender or assume that sex represents an absolute truth while disregarding individual gender identities. Overall, this perspective piece emphasizes the need for machine learning researchers to engage thoughtfully with questions of sex/gender in their research and algorithm development processes. By avoiding methodological pitfalls and considering the complexities of sex/gender, researchers can produce more inclusive research outcomes that better serve all patients, including transgender individuals.
AI-generated keywords: Sex/Gender Machine Learning Electronic Health Record (EHR) Binary Assumptions Gender Identity

AI-generated Key Points

  • False assumptions about sex and gender in the medical system
  • Three common mistakes made by researchers dealing with sex/gender data: "sex confusion," "sex obsession," and "sex/gender slippage"
  • Pitfalls of misusing or misinterpreting sex/gender data in machine learning studies based on electronic health record (EHR) data
  • Importance of working with data experts and collaborating with clinicians to handle such data properly
  • Clear descriptions of how sex/gender data were collected and utilized should be provided in research papers
  • Acknowledgment of limitations or changes in variables over time
  • Careful incorporation of gender, considering multiple dimensions beyond just biological sex
  • Need for machine learning researchers to engage thoughtfully with questions of sex/gender for inclusive research outcomes that serve all patients, including transgender individuals.
Also access our AI generated: Comprehensive summary, Lay summary, Blog-like article; or ask questions about this paper to our AI assistant.

Abstract: False assumptions about sex and gender are deeply embedded in the medical system, including that they are binary, static, and concordant. Machine learning researchers must understand the nature of these assumptions in order to avoid perpetuating them. In this perspectives piece, we identify three common mistakes that researchers make when dealing with sex/gender data: "sex confusion", the failure to identity what sex in a dataset does or doesn't mean; "sex obsession", the belief that sex, specifically sex assigned at birth, is the relevant variable for most applications; and "sex/gender slippage", the conflation of sex and gender even in contexts where only one or the other is known. We then discuss how these pitfalls show up in machine learning studies based on electronic health record data, which is commonly used for everything from retrospective analysis of patient outcomes to the development of algorithms to predict risk and administer care. Finally, we offer a series of recommendations about how machine learning researchers can produce both research and algorithms that more carefully engage with questions of sex/gender, better serving all patients, including transgender people.

Submitted to arXiv on 15 Mar. 2022

Tools for this paper

Explain it differently 3 free rewrites left today
Export BibTeX · RIS (Zotero, Mendeley, EndNote) · Markdown (Notion, Obsidian) · Premium
Citation alerts Premium
Journal club Slides to present it Premium
For journalists Press kit and hype check Premium

Ask questions about this paper to our AI assistant

You can also chat with multiple papers at once here.

Figures and plots

Ask about a figure by number or use its question button to request visual analysis. Up to two figures and four image panels per question. Values read from plots are approximate; check the original data.

AI assistant instructions?

Assess the quality of the AI-generated content by voting

Score: 0

Why do we need votes?

Votes are used to determine whether we need to re-run our summarizing tools. If the count reaches -10, our tools can be restarted.

The previous summary was created more than a year ago and can be re-run (if necessary) by clicking on the Run button below.

Similar papers summarized with our AI tools

Navigate through even more similar papers through a

tree representation

Disclaimer: The AI-based summarization tool and virtual assistant provided on this website may not always provide accurate and complete summaries or responses. We encourage you to carefully review and evaluate the generated content to ensure its quality and relevance to your needs.